Model info
Transcription factorNfatc1
ModelNFAC1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusWGGAAAndnTKWvhM
Best auROC (human)0.714129052684469
Best auROC (mouse)0.9551028012030293
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)8
Aligned words445
TF familyNFAT-related factors{6.1.3}
TF subfamilyNFATc1{6.1.3.0.1}
MGI102469
EntrezGene
UniProt IDNFAC1_MOUSE
UniProt ACO88942
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.83981
0.0005 5.91491
0.0001 8.06911
GTEx tissue expression atlas Nfatc1 expression
ReMap ChIP-seq dataset list Nfatc1 datasets
Motifs in JASPAR
PCM
ACGT
0189.018.032.0306.0
023.01.0441.00.0
031.02.0441.01.0
04432.04.08.01.0
05422.00.017.06.0
06369.023.032.021.0
07251.082.082.030.0
08167.032.047.0199.0
09156.0113.0119.057.0
1035.023.014.0373.0
1135.033.0301.076.0
12335.026.036.048.0
1364.0146.0199.036.0
1450.050.038.0307.0
1581.0271.053.040.0
PWM
ACGT
01-0.22-1.754-1.2131.003
02-3.216-3.7991.367-4.304
03-3.799-3.4661.367-3.799
041.347-3.016-2.472-3.799
051.323-4.304-1.806-2.707
061.19-1.526-1.213-1.611
070.806-0.3-0.3-1.275
080.402-1.213-0.8430.576
090.3340.0150.066-0.656
10-1.127-1.526-1.9831.2
11-1.127-1.1840.987-0.375
121.093-1.41-1.1-0.823
13-0.5430.2690.576-1.1
14-0.783-0.783-1.0481.006
15-0.3120.882-0.727-0.999