Model info
Transcription factorNfatc1
ModelNFAC1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
1
ConsensusvvvWGGAAAvn
Best auROC (human)0.689182726953149
Best auROC (mouse)0.9075691063360011
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)8
Aligned words500
TF familyNFAT-related factors{6.1.3}
TF subfamilyNFATc1{6.1.3.0.1}
MGI102469
EntrezGene
UniProt IDNFAC1_MOUSE
UniProt ACO88942
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.71525
0.0005 6.67472
0.0001 8.373
GTEx tissue expression atlas Nfatc1 expression
Motifs in JASPAR
PCM
ACGT
0182.0165.0207.046.0
02251.086.0107.056.0
03230.0102.0125.043.0
04117.010.021.0352.0
052.00.0497.01.0
062.02.0495.01.0
07478.01.020.01.0
08461.01.038.00.0
09440.017.028.015.0
10254.079.0146.021.0
11213.047.047.0193.0
PWM
ACGT
01-0.4150.2750.5-0.979
020.691-0.368-0.153-0.788
030.604-0.2010.0-1.044
04-0.065-2.394-1.7251.027
05-3.573-4.41.371-3.903
06-3.573-3.5731.367-3.903
071.332-3.903-1.77-3.903
081.296-3.903-1.163-4.4
091.25-1.92-1.454-2.034
100.703-0.4520.154-1.725
110.528-0.958-0.9580.43