Model info
Transcription factorNfatc1
ModelNFAC1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
1
ConsensusvvvWGGAAAvn
Best auROC (human)0.689182726953149
Best auROC (mouse)0.9075691063360011
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)8
Aligned words500
TF familyNFAT-related factors{6.1.3}
TF subfamilyNFATc1{6.1.3.0.1}
MGI102469
EntrezGene
UniProt IDNFAC1_MOUSE
UniProt ACO88942
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.71525
0.0005 6.67472
0.0001 8.373
GTEx tissue expression atlas Nfatc1 expression
ReMap ChIP-seq dataset list Nfatc1 datasets
Motifs in JASPAR
PCM
ACGT
0182.0165.0207.046.0
02251.086.0107.056.0
03230.0102.0125.043.0
04117.010.021.0352.0
052.00.0497.01.0
062.02.0495.01.0
07478.01.020.01.0
08461.01.038.00.0
09440.017.028.015.0
10254.079.0146.021.0
11213.047.047.0193.0
PWM
ACGT
01-0.4150.2750.5-0.979
020.691-0.368-0.153-0.788
030.604-0.2010.0-1.044
04-0.065-2.394-1.7251.027
05-3.573-4.41.371-3.903
06-3.573-3.5731.367-3.903
071.332-3.903-1.77-3.903
081.296-3.903-1.163-4.4
091.25-1.92-1.454-2.034
100.703-0.4520.154-1.725
110.528-0.958-0.9580.43