Model info
Transcription factorNfatc2
ModelNFAC2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensusdGGAAAWhb
Best auROC (human)
Best auROC (mouse)0.915
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words87
TF familyNFAT-related factors {6.1.3}
TF subfamilyNFATc2 (NFATp, NFAT1) {6.1.3.0.2}
MGIMGI:102463
EntrezGeneGeneID:18019
(SSTAR profile)
UniProt IDNFAC2_MOUSE
UniProt ACQ60591
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.665570000000001
0.0005 6.671635
0.0001 8.456154999999999
GTEx tissue expression atlas Nfatc2 expression
Motifs in JASPAR
PCM
ACGT
0122.0354.84612.4946.595
020.00.085.9660.0
030.00.085.9660.0
0485.9660.00.00.0
0583.5960.02.370.0
0681.8381.4392.6890.0
0768.3994.9945.2487.325
0825.54911.4538.49140.473
0913.74220.21314.71237.299
PWM
ACGT
010.024-1.333-0.5080.747
02-3.011-3.0111.349-3.011
03-3.011-3.0111.349-3.011
041.349-3.011-3.011-3.011
051.321-3.011-1.87-3.011
061.3-2.181-1.782-3.011
071.123-1.309-1.268-0.985
080.165-0.587-0.8560.61
09-0.42-0.058-0.3570.53