Model info
Transcription factorNfatc2
ModelNFAC2_MOUSE.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length7
Quality
C
Motif rank
1
ConsensusvWGGAAR
Best auROC (human)
Best auROC (mouse)0.9335610765113775
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words499
TF familyNFAT-related factors{6.1.3}
TF subfamilyNFATc2 (NFATp, NFAT1){6.1.3.0.2}
MGI102463
EntrezGene18019
UniProt IDNFAC2_MOUSE
UniProt ACQ60591
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.10006
0.0005 6.7944
0.0001 7.30361
GTEx tissue expression atlas Nfatc2 expression
ReMap ChIP-seq dataset list Nfatc2 datasets
Motifs in JASPAR
PCM
ACGT
01197.099.0154.049.0
02192.010.040.0257.0
035.00.0490.04.0
0415.02.0477.05.0
05452.027.05.015.0
06455.06.027.011.0
07303.067.0120.09.0
PWM
ACGT
010.452-0.2280.208-0.916
020.427-2.392-1.1120.716
03-2.959-4.3981.359-3.124
04-2.032-3.5711.332-2.959
051.278-1.487-2.959-2.032
061.285-2.817-1.487-2.309
070.88-0.611-0.038-2.482