Model info
Transcription factorNFIA
ModelNFIA_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
C
Motif rank
0
ConsensushTGGShnGnhKCCWd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words233
TF familyNuclear factor 1{7.1.2}
TF subfamilyNF-1A (NF-IA){7.1.2.0.1}
HGNC7784
EntrezGene4774
UniProt IDNFIA_HUMAN
UniProt ACQ12857
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.93311
0.0005 5.75961
0.0001 7.44761
GTEx tissue expression atlas NFIA expression
ReMap ChIP-seq dataset list NFIA datasets
Motifs in JASPAR
PCM
ACGT
0133.86749.84425.195124.094
027.8117.10116.129201.959
0310.6512.029204.59715.723
0415.3186.898199.2211.564
0525.867167.87526.7812.477
0696.74358.25128.5349.477
0750.0676.2848.23358.427
0885.6310.423146.6930.254
0953.6650.8280.23548.284
1070.530.48223.686108.332
1117.57516.154171.60327.668
1213.897189.27914.65815.165
1313.289195.46713.3910.854
14181.51914.91216.38320.187
15102.67920.92282.69626.704
PWM
ACGT
01-0.526-0.152-0.8090.744
02-1.872-1.952-1.2261.227
03-1.602-2.8671.24-1.25
04-1.274-1.9761.213-1.529
05-0.7841.043-0.751-1.46
060.4980.0-0.69-0.159
07-0.1480.264-0.1840.003
080.378-3.5080.91-3.608
09-0.08-0.1330.314-0.183
100.187-0.627-0.8670.61
11-1.147-1.2251.065-0.72
12-1.3631.163-1.314-1.283
13-1.4031.194-1.396-1.585
141.121-1.298-1.212-1.018
150.557-0.9840.344-0.753