Model info
Transcription factorNFIB
ModelNFIB_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
D
Motif rank
0
ConsensushYYTGGCWb
Best auROC (human)0.6123061758659752
Best auROC (mouse)0.8289859507970823
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words500
TF familyNuclear factor 1{7.1.2}
TF subfamilyNF-1B (NF-IB){7.1.2.0.2}
HGNC7785
EntrezGene4781
UniProt IDNFIB_HUMAN
UniProt ACO00712
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.45223
0.0005 6.61589
0.0001 7.96328
GTEx tissue expression atlas NFIB expression
ReMap ChIP-seq dataset list NFIB datasets
Motifs in JASPAR
PCM
ACGT
0188.0188.074.0150.0
0214.0289.075.0122.0
030.0282.01.0217.0
041.00.04.0495.0
050.00.0500.00.0
061.00.0497.02.0
0715.0482.02.01.0
08329.017.01.0153.0
0937.0147.0248.068.0
PWM
ACGT
01-0.3460.404-0.5160.18
02-2.0960.831-0.503-0.024
03-4.40.807-3.9030.546
04-3.903-4.4-3.1261.367
05-4.4-4.41.377-4.4
06-3.903-4.41.371-3.573
07-2.0341.34-3.573-3.903
080.96-1.92-3.9030.2
09-1.1890.160.679-0.599