Model info
Transcription factorNfib
ModelNFIB_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusnSYTGGCWbhndn
Best auROC (human)0.6243403668561637
Best auROC (mouse)0.844796190670243
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words501
TF familyNuclear factor 1{7.1.2}
TF subfamilyNF-1B{7.1.2.0.2}
MGI103188
EntrezGene18028
UniProt IDNFIB_MOUSE
UniProt ACP97863
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.89141
0.0005 12.60232
0.0001 16.03028
GTEx tissue expression atlas Nfib expression
ReMap ChIP-seq dataset list Nfib datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
014.058.033.017.02.077.03.018.00.084.025.019.06.0101.035.018.0
020.05.00.07.00.0155.00.0165.00.061.01.034.00.022.00.050.0
030.00.00.00.00.00.00.0243.00.00.00.01.00.00.00.0256.0
040.00.00.00.00.00.00.00.00.00.00.00.00.00.0500.00.0
050.00.00.00.00.00.00.00.00.00.0499.01.00.00.00.00.0
060.00.00.00.00.00.00.00.017.0482.00.00.00.01.00.00.0
0713.00.00.04.0274.06.05.0198.00.00.00.00.00.00.00.00.0
0814.0100.0119.054.00.04.02.00.01.01.03.00.04.092.062.044.0
095.09.04.01.070.078.017.032.060.086.022.018.031.049.09.09.0
1023.040.066.037.063.065.026.068.018.06.019.09.014.010.028.08.0
1122.011.059.026.022.026.024.049.019.032.068.020.018.06.080.018.0
128.028.033.012.011.032.010.022.053.055.070.053.07.036.042.028.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.9750.6130.054-0.599-2.5840.894-2.234-0.543-4.40.981-0.22-0.49-1.61.1650.112-0.543
02-4.4-1.77-4.4-1.454-4.41.592-4.41.654-4.40.663-3.1260.083-4.4-0.346-4.40.465
03-4.4-4.4-4.4-4.4-4.4-4.4-4.42.04-4.4-4.4-4.4-3.126-4.4-4.4-4.42.092
04-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.761-4.4
05-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.759-3.126-4.4-4.4-4.4-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-0.5992.724-4.4-4.4-4.4-3.126-4.4-4.4
07-0.86-4.4-4.4-1.9752.16-1.6-1.771.836-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
08-0.7881.1551.3280.542-4.4-1.975-2.584-4.4-3.126-3.126-2.234-4.4-1.9751.0720.6790.339
09-1.77-1.215-1.975-3.1260.80.907-0.5990.0230.6461.004-0.346-0.543-0.0080.445-1.215-1.215
10-0.3020.2440.7410.1670.6950.726-0.1810.771-0.543-1.6-0.49-1.215-0.788-1.114-0.108-1.328
11-0.346-1.0220.63-0.181-0.346-0.181-0.260.445-0.490.0230.771-0.439-0.543-1.60.932-0.543
12-1.328-0.1080.054-0.938-1.0220.023-1.114-0.3460.5230.560.80.523-1.4540.140.293-0.108