Model info
Transcription factorNfib
ModelNFIB_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
C
Motif rank
0
ConsensusYYTGGCWbv
Best auROC (human)0.5955393746170741
Best auROC (mouse)0.8321934477720166
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words500
TF familyNuclear factor 1{7.1.2}
TF subfamilyNF-1B{7.1.2.0.2}
MGI103188
EntrezGene18028
UniProt IDNFIB_MOUSE
UniProt ACP97863
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.16145
0.0005 6.40421
0.0001 7.836835
GTEx tissue expression atlas Nfib expression
Motifs in JASPAR
PCM
ACGT
0113.0274.0105.0108.0
022.0273.00.0225.0
030.00.07.0493.0
040.00.0500.00.0
051.00.0496.03.0
0612.0485.02.01.0
07323.013.02.0162.0
0827.0135.0261.077.0
09118.0212.0132.038.0
PWM
ACGT
01-2.1630.778-0.172-0.144
02-3.5730.774-4.40.582
03-4.4-4.4-2.6941.363
04-4.4-4.41.377-4.4
05-3.903-4.41.369-3.325
06-2.2341.347-3.573-3.903
070.942-2.163-3.5730.256
08-1.4890.0760.73-0.477
09-0.0570.5230.054-1.163