Model info
Transcription factorNfib
ModelNFIB_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
C
Motif rank
0
ConsensusYYTGGCWbv
Best auROC (human)0.5955393746170741
Best auROC (mouse)0.8321934477720166
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words500
TF familyNuclear factor 1{7.1.2}
TF subfamilyNF-1B{7.1.2.0.2}
MGI103188
EntrezGene18028
UniProt IDNFIB_MOUSE
UniProt ACP97863
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.16912
0.0005 6.40552
0.0001 7.85747
GTEx tissue expression atlas Nfib expression
ReMap ChIP-seq dataset list Nfib datasets
Motifs in JASPAR
PCM
ACGT
0113.0274.0105.0108.0
022.0273.00.0225.0
030.00.07.0493.0
040.00.0500.00.0
051.00.0496.03.0
0612.0485.02.01.0
07323.013.02.0162.0
0827.0135.0261.077.0
09118.0212.0132.038.0
PWM
ACGT
01-2.1630.778-0.172-0.144
02-3.5730.774-4.40.582
03-4.4-4.4-2.6941.363
04-4.4-4.41.377-4.4
05-3.903-4.41.369-3.325
06-2.2341.347-3.573-3.903
070.942-2.163-3.5730.256
08-1.4890.0760.73-0.477
09-0.0570.5230.054-1.163