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Model info
Transcription factorNfic
ModelNFIC_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnbYTGGCWbnndbYYhd
Best auROC (human)0.976
Best auROC (mouse)0.879
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)1
Aligned words295
TF familyNuclear factor 1 {7.1.2}
TF subfamilyNF-1C {7.1.2.0.3}
MGIMGI:109591
EntrezGeneGeneID:18029
(SSTAR profile)
UniProt IDNFIC_MOUSE
UniProt ACP70255
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.91406
0.0005 12.52206
0.0001 15.54786
GTEx tissue expression atlas Nfic expression
Motifs in JASPAR
MA0119.1 (NFIC::TLX1; Homo sapiens)
MA0161.1 (NFIC; Homo sapiens)
MA0161.2 (NFIC; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
014.026.019.042.02.016.05.023.05.024.04.013.07.049.022.034.0
020.08.01.09.00.032.00.083.00.028.01.021.02.028.010.072.0
030.00.00.02.05.00.03.088.01.00.01.010.02.00.025.0158.0
040.00.08.00.00.00.00.00.00.00.029.00.00.00.0257.01.0
050.00.00.00.00.00.00.00.00.00.0281.013.00.00.01.00.0
060.00.00.00.00.00.00.00.040.0242.00.00.01.012.00.00.0
0732.01.01.07.0141.017.07.089.00.00.00.00.00.00.00.00.0
0825.031.077.040.06.04.01.07.00.04.02.02.04.022.033.037.0
0912.06.012.05.024.015.01.021.034.028.028.023.015.016.029.026.0
1025.012.035.013.024.015.012.014.026.016.017.011.013.010.033.019.0
1129.08.042.09.022.09.05.017.040.09.037.011.017.03.017.020.0
1215.013.053.027.03.09.03.014.014.017.038.032.02.07.038.010.0
1316.011.03.04.09.018.02.017.07.094.011.020.06.048.04.025.0
147.012.07.012.017.0140.01.013.03.06.02.09.08.023.07.028.0
158.06.012.09.0124.037.03.017.03.06.05.03.018.07.019.018.0
1646.016.069.022.031.08.03.014.08.012.014.05.011.05.014.017.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.4620.3380.0290.813-2.077-0.139-1.2550.217-1.2550.259-1.462-0.342-0.9380.9660.1740.603
02-3.968-0.811-2.629-0.698-3.9680.543-3.9681.49-3.9680.411-2.6290.128-2.0770.411-0.5961.348
03-3.968-3.968-3.968-2.077-1.255-3.968-1.7231.548-2.629-3.968-2.629-0.596-2.077-3.9680.32.131
04-3.968-3.968-0.811-3.968-3.968-3.968-3.968-3.968-3.968-3.9680.446-3.968-3.968-3.9682.617-2.629
05-3.968-3.968-3.968-3.968-3.968-3.968-3.968-3.968-3.968-3.9682.706-0.342-3.968-3.968-2.629-3.968
06-3.968-3.968-3.968-3.968-3.968-3.968-3.968-3.9680.7642.557-3.968-3.968-2.629-0.419-3.968-3.968
070.543-2.629-2.629-0.9382.018-0.08-0.9381.559-3.968-3.968-3.968-3.968-3.968-3.968-3.968-3.968
080.30.5121.4150.764-1.084-1.462-2.629-0.938-3.968-1.462-2.077-2.077-1.4620.1740.5740.687
09-0.419-1.084-0.419-1.2550.259-0.202-2.6290.1280.6030.4110.4110.217-0.202-0.1390.4460.338
100.3-0.4190.632-0.3420.259-0.202-0.419-0.2690.338-0.139-0.08-0.504-0.342-0.5960.5740.029
110.446-0.8110.813-0.6980.174-0.698-1.255-0.080.764-0.6980.687-0.504-0.08-1.723-0.080.08
12-0.202-0.3421.0430.375-1.723-0.698-1.723-0.269-0.269-0.080.7130.543-2.077-0.9380.713-0.596
13-0.139-0.504-1.723-1.462-0.698-0.024-2.077-0.08-0.9381.614-0.5040.08-1.0840.945-1.4620.3
14-0.938-0.419-0.938-0.419-0.082.011-2.629-0.342-1.723-1.084-2.077-0.698-0.8110.217-0.9380.411
15-0.811-1.084-0.419-0.6981.890.687-1.723-0.08-1.723-1.084-1.255-1.723-0.024-0.9380.029-0.024
160.903-0.1391.3060.1740.512-0.811-1.723-0.269-0.811-0.419-0.269-1.255-0.504-1.255-0.269-0.08