Model info
Transcription factorNfil3
ModelNFIL3_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusdvTTATGYAAb
Best auROC (human)0.5426051114620943
Best auROC (mouse)0.8689319462185147
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words501
TF familyC/EBP-related{1.1.8}
TF subfamilyPAR factors{1.1.8.2}
MGI109495
EntrezGene18030
UniProt IDNFIL3_MOUSE
UniProt ACO08750
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.98018
0.0005 5.94002
0.0001 7.82219
GTEx tissue expression atlas Nfil3 expression
Motifs in JASPAR
PCM
ACGT
01167.046.0153.0134.0
02198.066.0214.022.0
030.05.01.0494.0
042.05.0134.0359.0
05411.06.038.045.0
0623.035.034.0408.0
0712.011.0475.02.0
0840.0165.04.0291.0
09437.057.04.02.0
10497.01.01.01.0
1119.0186.099.0196.0
PWM
ACGT
010.287-0.9790.20.069
020.455-0.6280.533-1.681
03-4.4-2.961-3.9031.365
04-3.573-2.9610.0691.047
051.182-2.819-1.163-1.0
06-1.64-1.242-1.271.174
07-2.234-2.3111.326-3.573
08-1.1140.275-3.1260.838
091.243-0.771-3.126-3.573
101.371-3.903-3.903-3.903
11-1.8180.393-0.230.445