Model info
Transcription factorNfil3
ModelNFIL3_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusdvTTATGYAAb
Best auROC (human)0.5426051114620943
Best auROC (mouse)0.8689319462185147
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words501
TF familyC/EBP-related{1.1.8}
TF subfamilyPAR factors{1.1.8.2}
MGI109495
EntrezGene18030
UniProt IDNFIL3_MOUSE
UniProt ACO08750
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.98018
0.0005 5.94002
0.0001 7.82219
GTEx tissue expression atlas Nfil3 expression
ReMap ChIP-seq dataset list Nfil3 datasets
Motifs in JASPAR
PCM
ACGT
01167.046.0153.0134.0
02198.066.0214.022.0
030.05.01.0494.0
042.05.0134.0359.0
05411.06.038.045.0
0623.035.034.0408.0
0712.011.0475.02.0
0840.0165.04.0291.0
09437.057.04.02.0
10497.01.01.01.0
1119.0186.099.0196.0
PWM
ACGT
010.287-0.9790.20.069
020.455-0.6280.533-1.681
03-4.4-2.961-3.9031.365
04-3.573-2.9610.0691.047
051.182-2.819-1.163-1.0
06-1.64-1.242-1.271.174
07-2.234-2.3111.326-3.573
08-1.1140.275-3.1260.838
091.243-0.771-3.126-3.573
101.371-3.903-3.903-3.903
11-1.8180.393-0.230.445