Model info
Transcription factorNFKB2
ModelNFKB2_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
B
Motif rank
0
ConsensusKGGRAAdYCCC
Best auROC (human)0.9765240142890848
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words500
TF familyNF-kappaB-related factors{6.1.1}
TF subfamilyNF-kappaB p50 subunit-like factors{6.1.1.1}
HGNC7795
EntrezGene4791
UniProt IDNFKB2_HUMAN
UniProt ACQ00653
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.41556
0.0005 5.45987
0.0001 7.54131
GTEx tissue expression atlas NFKB2 expression
ReMap ChIP-seq dataset list NFKB2 datasets
Motifs in JASPAR
PCM
ACGT
0159.026.0333.082.0
0232.01.0459.08.0
0321.01.0463.015.0
04272.02.0210.016.0
05406.039.054.01.0
06486.04.06.04.0
0793.061.0229.0117.0
0844.0236.014.0206.0
0966.0434.00.00.0
101.0488.01.010.0
1149.0418.010.023.0
PWM
ACGT
01-0.737-1.5250.972-0.415
02-1.328-3.9031.292-2.584
03-1.725-3.9031.3-2.034
040.771-3.5730.514-1.975
051.17-1.138-0.823-3.903
061.349-3.126-2.819-3.126
07-0.291-0.7050.6-0.065
08-1.0220.63-2.0960.495
09-0.6281.236-4.4-4.4
10-3.9031.353-3.903-2.394
11-0.9181.199-2.394-1.64