Model info
Transcription factorNfkb2
ModelNFKB2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusKGGRAAdYCCC
Best auROC (human)0.977
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words500
TF familyNF-kappaB-related factors {6.1.1}
TF subfamilyNF-kappaB p50 subunit-like factors {6.1.1.1}
MGIMGI:1099800
EntrezGeneGeneID:18034
(SSTAR profile)
UniProt IDNFKB2_MOUSE
UniProt ACQ9WTK5
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.43153
0.0005 5.455775
0.0001 7.506975000000001
GTEx tissue expression atlas Nfkb2 expression
Motifs in JASPAR
PCM
ACGT
0159.026.0333.082.0
0232.01.0459.08.0
0321.01.0463.015.0
04272.02.0210.016.0
05406.039.054.01.0
06486.04.06.04.0
0793.061.0229.0117.0
0844.0236.014.0206.0
0966.0434.00.00.0
101.0488.01.010.0
1149.0418.010.023.0
PWM
ACGT
01-0.737-1.5250.972-0.415
02-1.328-3.9031.292-2.584
03-1.725-3.9031.3-2.034
040.771-3.5730.514-1.975
051.17-1.138-0.823-3.903
061.349-3.126-2.819-3.126
07-0.291-0.7050.6-0.065
08-1.0220.63-2.0960.495
09-0.6281.236-4.4-4.4
10-3.9031.353-3.903-2.394
11-0.9181.199-2.394-1.64