Model info
Transcription factorNfyc
ModelNFYC_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
B
Motif rank
0
ConsensusbbRRCCAATSRRMR
Best auROC (human)0.695
Best auROC (mouse)0.994
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words500
TF familyHeteromeric CCAAT-binding factors {4.2.1}
TF subfamilyNF-YC {4.2.1.0.3}
MGIMGI:107901
EntrezGeneGeneID:18046
(SSTAR profile)
UniProt IDNFYC_MOUSE
UniProt ACP70353
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.8091099999999996
0.0005 5.03731
0.0001 7.603720000000001
GTEx tissue expression atlas Nfyc expression
Motifs in JASPAR
PCM
ACGT
0166.0167.099.0168.0
0254.0213.064.0169.0
03303.048.0135.014.0
04159.019.0271.051.0
050.0496.01.03.0
061.0498.00.01.0
07491.00.00.09.0
08495.01.03.01.0
090.02.00.0498.0
1048.0309.0118.025.0
11368.016.0113.03.0
1294.070.0299.037.0
13297.089.087.027.0
14214.018.0212.056.0
PWM
ACGT
01-0.6280.287-0.230.293
02-0.8230.528-0.6580.298
030.878-0.9380.076-2.096
040.238-1.8180.767-0.879
05-4.41.369-3.903-3.325
06-3.9031.373-4.4-3.903
071.359-4.4-4.4-2.484
081.367-3.903-3.325-3.903
09-4.4-3.573-4.41.373
10-0.9380.898-0.057-1.561
111.072-1.975-0.1-3.325
12-0.281-0.570.865-1.189
130.858-0.335-0.357-1.489
140.533-1.8680.523-0.788