Model info
Transcription factorNfyc
ModelNFYC_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
B
Motif rank
0
ConsensusbbRRCCAATSRRMR
Best auROC (human)0.6945516002236602
Best auROC (mouse)0.9936508813348351
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words500
TF familyHeteromeric CCAAT-binding factors{4.2.1}
TF subfamilyNF-YC{4.2.1.0.3}
MGI107901
EntrezGene18046
UniProt IDNFYC_MOUSE
UniProt ACP70353
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.80211
0.0005 5.04241
0.0001 7.60341
GTEx tissue expression atlas Nfyc expression
ReMap ChIP-seq dataset list Nfyc datasets
Motifs in JASPAR
PCM
ACGT
0166.0167.099.0168.0
0254.0213.064.0169.0
03303.048.0135.014.0
04159.019.0271.051.0
050.0496.01.03.0
061.0498.00.01.0
07491.00.00.09.0
08495.01.03.01.0
090.02.00.0498.0
1048.0309.0118.025.0
11368.016.0113.03.0
1294.070.0299.037.0
13297.089.087.027.0
14214.018.0212.056.0
PWM
ACGT
01-0.6280.287-0.230.293
02-0.8230.528-0.6580.298
030.878-0.9380.076-2.096
040.238-1.8180.767-0.879
05-4.41.369-3.903-3.325
06-3.9031.373-4.4-3.903
071.359-4.4-4.4-2.484
081.367-3.903-3.325-3.903
09-4.4-3.573-4.41.373
10-0.9380.898-0.057-1.561
111.072-1.975-0.1-3.325
12-0.281-0.570.865-1.189
130.858-0.335-0.357-1.489
140.533-1.8680.523-0.788