Model info
Transcription factorNfyc
ModelNFYC_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
B
Motif rank
0
ConsensusbbRRCCAATSRRMR
Best auROC (human)0.6945516002236602
Best auROC (mouse)0.9936508813348351
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)4
Aligned words500
TF familyHeteromeric CCAAT-binding factors{4.2.1}
TF subfamilyNF-YC{4.2.1.0.3}
MGI107901
EntrezGene18046
UniProt IDNFYC_MOUSE
UniProt ACP70353
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.80211
0.0005 5.04241
0.0001 7.60341
GTEx tissue expression atlas Nfyc expression
Motifs in JASPAR
PCM
ACGT
0166.0167.099.0168.0
0254.0213.064.0169.0
03303.048.0135.014.0
04159.019.0271.051.0
050.0496.01.03.0
061.0498.00.01.0
07491.00.00.09.0
08495.01.03.01.0
090.02.00.0498.0
1048.0309.0118.025.0
11368.016.0113.03.0
1294.070.0299.037.0
13297.089.087.027.0
14214.018.0212.056.0
PWM
ACGT
01-0.6280.287-0.230.293
02-0.8230.528-0.6580.298
030.878-0.9380.076-2.096
040.238-1.8180.767-0.879
05-4.41.369-3.903-3.325
06-3.9031.373-4.4-3.903
071.359-4.4-4.4-2.484
081.367-3.903-3.325-3.903
09-4.4-3.573-4.41.373
10-0.9380.898-0.057-1.561
111.072-1.975-0.1-3.325
12-0.281-0.570.865-1.189
130.858-0.335-0.357-1.489
140.533-1.8680.523-0.788