Model info
Transcription factorNeurog2
ModelNGN2_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusvvnRRCAGATGGb
Best auROC (human)
Best auROC (mouse)0.9838012891342113
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words513
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
MGI109619
EntrezGene11924
UniProt IDNGN2_MOUSE
UniProt ACP70447
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.2580100000000005
0.0005 9.781960000000002
0.0001 15.181675
GTEx tissue expression atlas Neurog2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0138.024.075.013.033.044.018.022.043.029.080.021.06.016.029.08.0
0219.025.050.026.031.016.018.048.039.045.068.050.07.011.038.08.0
0335.05.053.03.072.03.016.06.0102.013.051.08.031.08.091.02.0
04103.021.0116.00.022.02.05.00.089.037.084.01.05.09.05.00.0
051.0217.00.01.00.069.00.00.00.0210.00.00.00.01.00.00.0
061.00.00.00.0495.00.02.00.00.00.00.00.01.00.00.00.0
071.03.0452.041.00.00.00.00.00.01.01.00.00.00.00.00.0
081.00.00.00.04.00.00.00.0347.096.09.01.041.00.00.00.0
0913.04.00.0376.03.00.00.093.00.00.00.09.00.00.00.01.0
100.00.016.00.00.00.04.00.00.00.00.00.00.00.0472.07.0
110.00.00.00.00.00.00.00.00.027.0406.059.00.01.06.00.0
120.00.00.00.05.012.02.09.054.0158.091.0109.00.020.029.010.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.195-0.2580.87-0.8580.0560.341-0.541-0.3440.318-0.0720.934-0.39-1.598-0.656-0.072-1.326
02-0.488-0.2180.467-0.179-0.006-0.656-0.5410.4270.2210.3630.7730.467-1.452-1.020.195-1.326
030.114-1.7680.525-2.2320.83-2.232-0.656-1.5981.176-0.8580.487-1.326-0.006-1.3261.063-2.582
041.186-0.391.305-4.398-0.344-2.582-1.768-4.3981.0410.1690.983-3.124-1.768-1.213-1.768-4.398
05-3.1241.929-4.398-3.124-4.3980.787-4.398-4.398-4.3981.897-4.398-4.398-4.398-3.124-4.398-4.398
06-3.124-4.398-4.398-4.3982.753-4.398-2.582-4.398-4.398-4.398-4.398-4.398-3.124-4.398-4.398-4.398
07-3.124-2.2322.6620.271-4.398-4.398-4.398-4.398-4.398-3.124-3.124-4.398-4.398-4.398-4.398-4.398
08-3.124-4.398-4.398-4.398-1.973-4.398-4.398-4.3982.3981.116-1.213-3.1240.271-4.398-4.398-4.398
09-0.858-1.973-4.3982.478-2.232-4.398-4.3981.084-4.398-4.398-4.398-1.213-4.398-4.398-4.398-3.124
10-4.398-4.398-0.656-4.398-4.398-4.398-1.973-4.398-4.398-4.398-4.398-4.398-4.398-4.3982.705-1.452
11-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-0.1422.5550.632-4.398-3.124-1.598-4.398
12-4.398-4.398-4.398-4.398-1.768-0.936-2.582-1.2130.5441.6131.0631.243-4.398-0.437-0.072-1.112