Model info
Transcription factorNKX2-3
ModelNKX23_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusndbAAGTGKbh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1260
TF familyNK-related factors{3.1.2}
TF subfamilyNK-4{3.1.2.17}
HGNC7836
EntrezGene159296
UniProt IDNKX23_HUMAN
UniProt ACQ8TAU0
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.16738
0.0005 6.135795
0.0001 7.889045000000001
GTEx tissue expression atlas NKX2-3 expression
ReMap ChIP-seq dataset list NKX2-3 datasets
Motifs in JASPAR
PCM
ACGT
01173.996316.743380.69375.58
02190.57150.121159.521746.796
03106.746378.277164.808597.177
041142.0367.95675.26921.747
051173.0575.30463.4575.19
067.4266.2511224.8458.487
0732.3243.41936.1911175.073
0826.7527.1321203.879.254
0932.296132.814923.236158.662
10154.781246.436350.342495.45
11274.24246.818225.35500.6
PWM
ACGT
01-0.5790.0160.1990.185
02-0.489-0.725-0.6650.87
03-1.0610.192-0.6320.647
041.294-3.472-1.403-2.59
051.321-3.79-1.57-3.806
06-3.528-3.6641.364-3.419
07-2.218-4.099-2.1111.323
08-2.397-3.561.347-3.347
09-2.219-0.8461.082-0.67
10-0.694-0.2340.1160.461
11-0.127-0.232-0.3220.471