Model info
Transcription factorNkx2-8
ModelNKX28_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensusbTCAAGGAb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words6
TF familyNK-related factors{3.1.2}
TF subfamilyNK-2.2{3.1.2.15}
MGI1270158
EntrezGene18094
UniProt IDNKX28_MOUSE
UniProt ACO70584
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.369035
0.0005 5.94348
0.0001 7.26813
GTEx tissue expression atlas Nkx2-8 expression
Motifs in JASPAR
PCM
ACGT
010.1471.2061.2063.441
020.00.00.06.0
030.04.6471.3530.0
045.7060.00.2940.0
056.00.00.00.0
060.00.06.00.0
070.00.03.5882.412
083.5880.02.4120.0
090.1473.4411.2061.206
PWM
ACGT
01-1.186-0.164-0.1640.691
02-1.47-1.47-1.471.197
03-1.470.961-0.078-1.47
041.15-1.47-0.965-1.47
051.197-1.47-1.47-1.47
06-1.47-1.471.197-1.47
07-1.47-1.470.7290.384
080.729-1.470.384-1.47
09-1.1860.691-0.164-0.164