Model info
Transcription factorNKX3-2
ModelNKX32_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
C
Motif rank
0
ConsensusWTAAGTGbhh
Best auROC (human)
Best auROC (mouse)0.9824783969923785
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)6
Aligned words501
TF familyNK-related factors{3.1.2}
TF subfamilyNK-3{3.1.2.16}
HGNC951
EntrezGene579
UniProt IDNKX32_HUMAN
UniProt ACP78367
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.986695
0.0005 5.954965
0.0001 8.10019
GTEx tissue expression atlas NKX3-2 expression
ReMap ChIP-seq dataset list NKX3-2 datasets
Motifs in JASPAR
PCM
ACGT
0175.044.040.0339.0
0217.00.012.0469.0
03467.02.028.01.0
04496.00.01.01.0
051.01.0483.013.0
069.00.07.0482.0
0743.00.0447.08.0
0826.0128.0151.0193.0
09124.066.063.0245.0
10100.081.031.0286.0
PWM
ACGT
01-0.499-1.018-1.110.994
02-1.916-4.397-2.231.317
031.313-3.569-1.451-3.9
041.373-4.397-3.9-3.9
05-3.9-3.91.347-2.159
06-2.48-4.397-2.691.344
07-1.04-4.3971.269-2.58
08-1.5210.0270.1910.434
09-0.004-0.624-0.6690.671
10-0.216-0.423-1.3540.825