Model info
Transcription factorNKX6-1
ModelNKX61_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
B
Motif rank
0
ConsensusddRhdRATKdvndWWWRAWddn
Best auROC (human)0.4618640680014475
Best auROC (mouse)0.9784056060568573
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)8
Aligned words503
TF familyNK-related factors{3.1.2}
TF subfamilyNK-6{3.1.2.19}
HGNC7839
EntrezGene4825
UniProt IDNKX61_HUMAN
UniProt ACP78426
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.52536
0.0005 13.28836
0.0001 16.92896
GTEx tissue expression atlas NKX6-1 expression
ReMap ChIP-seq dataset list NKX6-1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0142.012.0108.015.034.012.09.017.025.011.023.014.031.08.0117.022.0
0296.07.026.03.013.015.05.010.0210.017.017.013.033.05.020.010.0
0362.071.035.0184.09.015.06.014.016.022.03.027.05.015.03.013.0
0439.06.011.036.060.02.05.056.013.00.013.021.045.013.041.0139.0
05115.09.030.03.014.01.03.03.030.03.030.07.0153.010.068.021.0
06305.01.05.01.023.00.00.00.0129.00.01.01.033.00.01.00.0
0720.025.048.0397.01.00.00.00.00.01.00.06.00.00.01.01.0
084.03.08.06.02.00.012.012.03.013.07.026.024.034.0243.0103.0
098.04.014.07.030.05.05.010.0101.026.0105.038.046.03.075.023.0
1015.064.095.011.017.010.06.05.026.074.068.031.010.014.044.010.0
1116.017.017.018.060.026.07.069.076.050.043.044.013.012.014.018.0
1291.07.024.043.044.08.05.048.047.07.08.019.051.07.016.075.0
13126.06.012.089.07.03.00.019.028.01.03.021.043.012.07.0123.0
14112.02.015.075.05.01.01.015.07.00.01.014.037.017.08.0190.0
1529.028.09.095.07.03.01.09.06.06.01.012.025.024.08.0237.0
1634.08.025.00.039.013.05.04.011.01.07.00.0224.032.085.012.0
17302.00.03.03.054.00.00.00.0118.00.04.00.016.00.00.00.0
1862.018.032.0378.00.00.00.00.00.03.01.03.02.00.00.01.0
1910.07.027.020.011.01.04.05.04.00.015.014.053.032.0156.0141.0
2022.07.047.02.017.07.07.09.0103.024.056.019.051.08.089.032.0
2134.058.071.030.021.09.03.013.042.073.054.030.011.013.030.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.293-0.9381.231-0.7210.083-0.938-1.215-0.599-0.22-1.022-0.302-0.788-0.008-1.3281.311-0.346
021.114-1.454-0.181-2.234-0.86-0.721-1.77-1.1141.895-0.599-0.599-0.860.054-1.77-0.439-1.114
030.6790.8140.1121.763-1.215-0.721-1.6-0.788-0.658-0.346-2.234-0.144-1.77-0.721-2.234-0.86
040.219-1.6-1.0220.140.646-2.584-1.770.578-0.86-4.4-0.86-0.3920.361-0.860.2691.483
051.294-1.215-0.04-2.234-0.788-3.126-2.234-2.234-0.04-2.234-0.04-1.4541.579-1.1140.771-0.392
062.267-3.126-1.77-3.126-0.302-4.4-4.4-4.41.408-4.4-3.126-3.1260.054-4.4-3.126-4.4
07-0.439-0.220.4252.531-3.126-4.4-4.4-4.4-4.4-3.126-4.4-1.6-4.4-4.4-3.126-3.126
08-1.975-2.234-1.328-1.6-2.584-4.4-0.938-0.938-2.234-0.86-1.454-0.181-0.260.0832.041.184
09-1.328-1.975-0.788-1.454-0.04-1.77-1.77-1.1141.165-0.1811.2030.1930.383-2.2340.868-0.302
10-0.7210.7111.104-1.022-0.599-1.114-1.6-1.77-0.1810.8550.771-0.008-1.114-0.7880.339-1.114
11-0.658-0.599-0.599-0.5430.646-0.181-1.4540.7850.8810.4650.3160.339-0.86-0.938-0.788-0.543
121.061-1.454-0.260.3160.339-1.328-1.770.4250.404-1.454-1.328-0.490.485-1.454-0.6580.868
131.385-1.6-0.9381.039-1.454-2.234-4.4-0.49-0.108-3.126-2.234-0.3920.316-0.938-1.4541.361
141.268-2.584-0.7210.868-1.77-3.126-3.126-0.721-1.454-4.4-3.126-0.7880.167-0.599-1.3281.795
15-0.074-0.108-1.2151.104-1.454-2.234-3.126-1.215-1.6-1.6-3.126-0.938-0.22-0.26-1.3282.015
160.083-1.328-0.22-4.40.219-0.86-1.77-1.975-1.022-3.126-1.454-4.41.9590.0230.993-0.938
172.257-4.4-2.234-2.2340.542-4.4-4.4-4.41.32-4.4-1.975-4.4-0.658-4.4-4.4-4.4
180.679-0.5430.0232.482-4.4-4.4-4.4-4.4-4.4-2.234-3.126-2.234-2.584-4.4-4.4-3.126
19-1.114-1.454-0.144-0.439-1.022-3.126-1.975-1.77-1.975-4.4-0.721-0.7880.5230.0231.5981.497
20-0.346-1.4540.404-2.584-0.599-1.454-1.454-1.2151.184-0.260.578-0.490.485-1.3281.0390.023
210.0830.6130.814-0.04-0.392-1.215-2.234-0.860.2930.8410.542-0.04-1.022-0.86-0.04-1.328