Model info
Transcription factorNkx6-1
ModelNKX61_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
A
Motif rank
0
ConsensusddRhdRAKKdbhdWWWRAWddn
Best auROC (human)0.43496341815547596
Best auROC (mouse)0.9752554792478808
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)8
Aligned words510
TF familyNK-related factors{3.1.2}
TF subfamilyNK-6{3.1.2.19}
MGI1206039
EntrezGene18096
UniProt IDNKX61_MOUSE
UniProt ACQ99MA9
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.53931
0.0005 13.234210000000001
0.0001 16.73986
GTEx tissue expression atlas Nkx6-1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0151.05.096.017.029.09.09.017.038.04.025.024.032.017.088.038.0
02106.017.020.07.012.012.00.011.0175.017.017.09.046.012.024.014.0
0370.065.030.0174.015.014.05.024.011.020.07.023.07.07.010.017.0
0440.09.015.039.046.01.06.053.017.08.04.023.039.010.046.0143.0
05105.011.016.010.020.01.04.03.044.04.019.04.0139.014.058.047.0
06299.01.04.04.030.00.00.00.092.01.01.03.061.01.02.00.0
0737.017.065.0363.00.00.01.02.00.00.02.05.00.00.02.05.0
081.05.016.015.03.01.03.010.08.024.011.027.013.025.0225.0112.0
093.00.016.06.024.02.08.021.097.021.091.046.035.014.082.033.0
1017.053.070.019.09.09.08.011.040.067.056.034.09.029.049.019.0
1120.020.09.026.056.026.07.069.056.054.027.046.021.019.017.026.0
1264.09.033.047.046.010.02.061.038.02.06.014.032.015.024.096.0
13104.03.06.067.011.02.00.023.026.00.04.035.054.010.00.0154.0
1498.04.015.078.03.01.00.011.03.00.02.05.046.08.010.0215.0
1529.014.06.0101.00.04.01.08.05.02.03.017.031.029.011.0238.0
1646.03.013.03.033.09.04.03.015.05.01.00.0252.049.054.09.0
17337.06.02.01.064.01.00.01.072.00.00.00.015.00.00.00.0
1859.031.025.0373.02.01.01.03.01.01.00.00.00.00.00.02.0
1914.09.016.023.013.02.013.05.00.01.05.020.045.018.0153.0162.0
2024.05.036.07.019.04.02.05.079.027.051.030.056.016.097.041.0
2135.053.054.036.024.012.02.014.049.038.047.052.021.018.031.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.487-1.7681.116-0.597-0.072-1.213-1.213-0.5970.195-1.973-0.218-0.2580.025-0.5971.0290.195
021.215-0.597-0.437-1.452-0.936-0.936-4.398-1.021.715-0.597-0.597-1.2130.385-0.936-0.258-0.786
030.8020.728-0.0381.709-0.719-0.786-1.768-0.258-1.02-0.437-1.452-0.3-1.452-1.452-1.112-0.597
040.246-1.213-0.7190.2210.385-3.124-1.5980.525-0.597-1.326-1.973-0.30.221-1.1120.3851.513
051.205-1.02-0.656-1.112-0.437-3.124-1.973-2.2320.341-1.973-0.488-1.9731.485-0.7860.6150.406
062.249-3.124-1.973-1.973-0.038-4.398-4.398-4.3981.074-3.124-3.124-2.2320.665-3.124-2.582-4.398
070.169-0.5970.7282.443-4.398-4.398-3.124-2.582-4.398-4.398-2.582-1.768-4.398-4.398-2.582-1.768
08-3.124-1.768-0.656-0.719-2.232-3.124-2.232-1.112-1.326-0.258-1.02-0.142-0.858-0.2181.9651.27
09-2.232-4.398-0.656-1.598-0.258-2.582-1.326-0.391.126-0.391.0630.3850.114-0.7860.9590.056
10-0.5970.5250.802-0.488-1.213-1.213-1.326-1.020.2460.7580.580.085-1.213-0.0720.447-0.488
11-0.437-0.437-1.213-0.1790.58-0.179-1.4520.7870.580.544-0.1420.385-0.39-0.488-0.597-0.179
120.713-1.2130.0560.4060.385-1.112-2.5820.6650.195-2.582-1.598-0.7860.025-0.719-0.2581.116
131.196-2.232-1.5980.758-1.02-2.582-4.398-0.3-0.179-4.398-1.9730.1140.544-1.112-4.3981.587
141.137-1.973-0.7190.909-2.232-3.124-4.398-1.02-2.232-4.398-2.582-1.7680.385-1.326-1.1121.92
15-0.072-0.786-1.5981.167-4.398-1.973-3.124-1.326-1.768-2.582-2.232-0.597-0.006-0.072-1.022.022
160.385-2.232-0.858-2.2320.056-1.213-1.973-2.232-0.719-1.768-3.124-4.3982.0790.4470.544-1.213
172.369-1.598-2.582-3.1240.713-3.124-4.398-3.1240.83-4.398-4.398-4.398-0.719-4.398-4.398-4.398
180.632-0.006-0.2182.47-2.582-3.124-3.124-2.232-3.124-3.124-4.398-4.398-4.398-4.398-4.398-2.582
19-0.786-1.213-0.656-0.3-0.858-2.582-0.858-1.768-4.398-3.124-1.768-0.4370.363-0.5411.5811.638
20-0.258-1.7680.142-1.452-0.488-1.973-2.582-1.7680.922-0.1420.487-0.0380.58-0.6561.1260.271
210.1140.5250.5440.142-0.258-0.936-2.582-0.7860.4470.1950.4060.506-0.39-0.541-0.006-0.858