Model info
Transcription factorNkx6-1
ModelNKX61_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
1
ConsensusdWhAATGRv
Best auROC (human)0.4484500028866071
Best auROC (mouse)0.8668569138560106
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)8
Aligned words500
TF familyNK-related factors{3.1.2}
TF subfamilyNK-6{3.1.2.19}
MGI1206039
EntrezGene18096
UniProt IDNKX61_MOUSE
UniProt ACQ99MA9
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.313935
0.0005 6.780115
0.0001 7.48715
GTEx tissue expression atlas Nkx6-1 expression
Motifs in JASPAR
PCM
ACGT
01219.088.094.099.0
02177.0100.04.0219.0
03180.082.045.0193.0
04485.00.013.02.0
05497.01.01.01.0
063.02.01.0494.0
070.05.0490.05.0
08277.049.0160.014.0
09187.0136.0107.070.0
PWM
ACGT
010.555-0.346-0.281-0.23
020.344-0.22-3.1260.555
030.361-0.415-1.00.43
041.347-4.4-2.163-3.573
051.371-3.903-3.903-3.903
06-3.325-3.573-3.9031.365
07-4.4-2.9611.357-2.961
080.789-0.9180.244-2.096
090.3990.083-0.153-0.57