Model info
Transcription factorNKX6-2
ModelNKX62_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusndWTAATKRbn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8076
TF familyNK-related factors{3.1.2}
TF subfamilyNK-6{3.1.2.19}
HGNC19321
EntrezGene84504
UniProt IDNKX62_HUMAN
UniProt ACQ9C056
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.8134049999999995
0.0005 6.722339999999999
0.0001 8.029135
GTEx tissue expression atlas NKX6-2 expression
ReMap ChIP-seq dataset list NKX6-2 datasets
Motifs in JASPAR
PCM
ACGT
012466.8331765.4731600.9052227.939
022800.0911227.8811428.8212604.357
031508.376364.126447.9985740.649
04149.113188.475100.4427623.12
057665.2493.857239.172152.872
068059.2570.860.1720.86
0777.5210.17213.3177970.139
08889.815239.9642981.7023949.668
095055.679248.1522469.624287.693
10730.7183715.3662375.1831239.883
111563.512729.9692069.6321698.037
PWM
ACGT
010.202-0.132-0.230.1
020.329-0.495-0.3430.256
03-0.289-1.706-1.51.046
04-2.59-2.359-2.9781.33
051.335-5.8-2.123-2.565
061.385-6.475-6.726-6.475
07-3.23-6.726-4.8651.374
08-0.816-2.120.3910.672
090.919-2.0870.203-1.94
10-1.0130.6110.164-0.485
11-0.2540.3030.027-0.171