Model info
Transcription factorNOBOX
ModelNOBOX_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensushTAATTGvb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words66
TF familyPaired-related HD factors{3.1.3}
TF subfamilyNOBOX{3.1.3.15}
HGNC22448
EntrezGene135935
UniProt IDNOBOX_HUMAN
UniProt ACO60393
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.432779999999999
0.0005 6.46477
0.0001 7.910030000000001
GTEx tissue expression atlas NOBOX expression
ReMap ChIP-seq dataset list NOBOX datasets
Motifs in JASPAR
PCM
ACGT
0119.33221.8533.36221.772
020.00.00.066.319
0364.6380.00.01.681
0464.6381.6810.00.0
051.6811.6811.68161.276
061.6810.06.72457.914
0724.2910.042.0280.0
0812.52420.17429.4184.203
095.46417.98811.34731.52
PWM
ACGT
010.1450.262-1.3860.258
02-2.822-2.822-2.8221.341
031.315-2.822-2.822-1.865
041.315-1.865-2.822-2.822
05-1.865-1.865-1.8651.263
06-1.865-2.822-0.8191.207
070.363-2.8220.893-2.822
08-0.2610.1860.547-1.211
09-0.9960.077-0.3520.614