Model info
Transcription factorNobox
ModelNOBOX_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensushTAATTGvb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words66
TF family
TF subfamily
MGI108011
EntrezGene18291
UniProt IDNOBOX_MOUSE
UniProt ACQ8VIH1
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.266695
0.0005 6.336485
0.0001 7.8682300000000005
GTEx tissue expression atlas Nobox expression
Motifs in JASPAR
PCM
ACGT
0119.33221.8533.36221.772
020.00.00.066.319
0364.6380.00.01.681
0464.6381.6810.00.0
051.6811.6811.68161.276
061.6810.06.72457.914
0724.2910.042.0280.0
0812.52420.17429.4184.203
095.46417.98811.34731.52
PWM
ACGT
010.1450.262-1.3860.258
02-2.822-2.822-2.8221.341
031.315-2.822-2.822-1.865
041.315-1.865-2.822-2.822
05-1.865-1.865-1.8651.263
06-1.865-2.822-0.8191.207
070.363-2.8220.893-2.822
08-0.2610.1860.547-1.211
09-0.9960.077-0.3520.614