Model info
Transcription factorNR2C1
ModelNR2C1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
C
Motif rank
0
ConsensusRbYvARAGGTCAn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words19
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyTesticular receptors (NR2C){2.1.3.4}
HGNC7971
EntrezGene7181
UniProt IDNR2C1_HUMAN
UniProt ACP13056
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.836264999999999
0.0005 5.62771
0.0001 7.273605
GTEx tissue expression atlas NR2C1 expression
ReMap ChIP-seq dataset list NR2C1 datasets
Motifs in JASPAR
PCM
ACGT
013.9492.02811.1010.961
020.9615.9788.0063.096
031.92110.0340.9615.124
044.8038.1124.0561.067
0512.1690.05.8710.0
064.1632.8829.9271.067
0717.0790.00.9610.0
080.00.018.0390.0
090.00.013.9834.056
100.00.00.018.039
110.018.0390.00.0
1216.9720.00.01.067
131.6814.7776.8054.777
PWM
ACGT
01-0.113-0.6430.815-1.134
02-1.1340.2470.512-0.315
03-0.6830.721-1.1340.111
040.0550.524-0.091-1.072
050.902-1.9790.231-1.979
06-0.069-0.3730.711-1.072
071.224-1.979-1.134-1.979
08-1.979-1.9791.277-1.979
09-1.979-1.9791.033-0.091
10-1.979-1.979-1.9791.277
11-1.9791.277-1.979-1.979
121.218-1.979-1.979-1.072
13-0.7780.050.3640.05