Model info
Transcription factorNr2c1
ModelNR2C1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
C
Motif rank
0
ConsensusRbYvARAGGTCAn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words19
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyTesticular receptors (NR2C){2.1.3.4}
MGI1352465
EntrezGene22025
UniProt IDNR2C1_MOUSE
UniProt ACQ505F1
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9687149999999995
0.0005 5.763515
0.0001 7.410145
GTEx tissue expression atlas Nr2c1 expression
Motifs in JASPAR
PCM
ACGT
013.9492.02811.1010.961
020.9615.9788.0063.096
031.92110.0340.9615.124
044.8038.1124.0561.067
0512.1690.05.8710.0
064.1632.8829.9271.067
0717.0790.00.9610.0
080.00.018.0390.0
090.00.013.9834.056
100.00.00.018.039
110.018.0390.00.0
1216.9720.00.01.067
131.6814.7776.8054.777
PWM
ACGT
01-0.113-0.6430.815-1.134
02-1.1340.2470.512-0.315
03-0.6830.721-1.1340.111
040.0550.524-0.091-1.072
050.902-1.9790.231-1.979
06-0.069-0.3730.711-1.072
071.224-1.979-1.134-1.979
08-1.979-1.9791.277-1.979
09-1.979-1.9791.033-0.091
10-1.979-1.979-1.9791.277
11-1.9791.277-1.979-1.979
121.218-1.979-1.979-1.072
13-0.7780.050.3640.05