Model info
Transcription factorNR2C2
ModelNR2C2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusdbnRbTYMMGGGKYRv
Best auROC (human)0.8850844850395738
Best auROC (mouse)
Peak sets in benchmark (human)35
Peak sets in benchmark (mouse)
Aligned words556
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyTesticular receptors (NR2C){2.1.3.4}
HGNC7972
EntrezGene7182
UniProt IDNR2C2_HUMAN
UniProt ACP49116
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.2633600000000005
0.0005 9.060860000000002
0.0001 12.750810000000001
GTEx tissue expression atlas NR2C2 expression
ReMap ChIP-seq dataset list NR2C2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0120.037.0116.020.012.021.025.07.021.09.038.018.021.040.041.048.0
0223.09.035.07.031.045.08.023.073.048.063.036.012.049.07.025.0
0323.07.0107.02.071.019.049.012.014.02.094.03.035.09.041.06.0
043.097.024.019.010.017.04.06.07.072.0176.036.01.015.05.02.0
050.00.02.019.013.04.04.0180.03.05.010.0191.02.00.02.059.0
060.06.00.012.00.01.00.08.01.010.01.06.02.0137.023.0287.0
072.01.00.00.0129.013.011.01.018.06.00.00.028.0281.03.01.0
0899.04.073.01.06.0282.012.01.05.01.08.00.02.00.00.00.0
0975.00.036.01.031.00.0256.00.058.00.034.01.02.00.00.00.0
102.01.0156.07.00.00.00.00.07.06.0312.01.00.00.02.00.0
110.00.09.00.01.00.05.01.018.011.0371.070.00.00.02.06.0
122.02.06.09.01.00.06.04.07.010.099.0271.01.09.017.050.0
131.04.05.01.01.016.01.03.04.078.024.022.04.0262.028.040.0
145.02.01.02.0236.021.099.04.034.017.07.00.028.021.012.05.0
1569.074.0120.040.07.013.026.015.011.041.054.013.06.01.01.03.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.4270.1791.315-0.427-0.926-0.38-0.208-1.443-0.38-1.2030.205-0.531-0.380.2560.2810.437
02-0.29-1.2030.124-1.4430.0040.373-1.316-0.290.8530.4370.7070.152-0.9260.457-1.443-0.208
03-0.29-1.4431.234-2.5720.826-0.4780.457-0.926-0.776-2.5721.105-2.2220.124-1.2030.281-1.588
04-2.2221.136-0.248-0.478-1.102-0.587-1.964-1.588-1.4430.841.730.152-3.115-0.709-1.758-2.572
05-4.39-4.39-2.572-0.478-0.848-1.964-1.9641.753-2.222-1.758-1.1021.812-2.572-4.39-2.5720.642
06-4.39-1.588-4.39-0.926-4.39-3.115-4.39-1.316-3.115-1.102-3.115-1.588-2.5721.48-0.292.218
07-2.572-3.115-4.39-4.391.42-0.848-1.01-3.115-0.531-1.588-4.39-4.39-0.0962.197-2.222-3.115
081.157-1.9640.853-3.115-1.5882.201-0.926-3.115-1.758-3.115-1.316-4.39-2.572-4.39-4.39-4.39
090.88-4.390.152-3.1150.004-4.392.104-4.390.625-4.390.095-3.115-2.572-4.39-4.39-4.39
10-2.572-3.1151.61-1.443-4.39-4.39-4.39-4.39-1.443-1.5882.302-3.115-4.39-4.39-2.572-4.39
11-4.39-4.39-1.203-4.39-3.115-4.39-1.758-3.115-0.531-1.012.4750.812-4.39-4.39-2.572-1.588
12-2.572-2.572-1.588-1.203-3.115-4.39-1.588-1.964-1.443-1.1021.1572.161-3.115-1.203-0.5870.477
13-3.115-1.964-1.758-3.115-3.115-0.646-3.115-2.222-1.9640.919-0.248-0.334-1.9642.127-0.0960.256
14-1.758-2.572-3.115-2.5722.023-0.381.157-1.9640.095-0.587-1.443-4.39-0.096-0.38-0.926-1.758
150.7970.8671.3480.256-1.443-0.848-0.17-0.709-1.010.2810.554-0.848-1.588-3.115-3.115-2.222