Model info
Transcription factorNR2C2
ModelNR2C2_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
B
Motif rank
0
ConsensusRbTYMSGGGKCR
Best auROC (human)0.8435007759651167
Best auROC (mouse)
Peak sets in benchmark (human)35
Peak sets in benchmark (mouse)
Aligned words502
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyTesticular receptors (NR2C){2.1.3.4}
HGNC7972
EntrezGene7182
UniProt IDNR2C2_HUMAN
UniProt ACP49116
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.230815
0.0005 5.123915
0.0001 6.9409350000000005
GTEx tissue expression atlas NR2C2 expression
ReMap ChIP-seq dataset list NR2C2 datasets
Motifs in JASPAR
PCM
ACGT
01104.056.0313.027.0
0221.0160.0227.092.0
0315.014.046.0425.0
044.0202.027.0267.0
05187.0294.014.05.0
06118.0233.0146.03.0
07179.00.0319.02.0
088.03.0478.011.0
098.06.0425.061.0
104.015.0114.0367.0
1110.0401.059.030.0
12338.021.0131.010.0
PWM
ACGT
01-0.181-0.7880.91-1.489
02-1.7250.2440.591-0.302
03-2.034-2.096-0.9791.215
04-3.1260.475-1.4890.752
050.3990.848-2.096-2.961
06-0.0570.6170.154-3.325
070.355-4.40.929-3.573
08-2.584-3.3251.332-2.311
09-2.584-2.8191.215-0.705
10-3.126-2.034-0.0911.069
11-2.3941.157-0.737-1.389
120.987-1.7250.046-2.394