Model info
Transcription factorNr2c2
ModelNR2C2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
A
Motif rank
0
ConsensusRRSbSARAGGKMR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2062
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyTesticular receptors (NR2C){2.1.3.4}
MGI1352466
EntrezGene22026
UniProt IDNR2C2_MOUSE
UniProt ACP49117
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.08961
0.0005 5.925565
0.0001 7.648975
GTEx tissue expression atlas Nr2c2 expression
Motifs in JASPAR
PCM
ACGT
01986.39173.566797.801100.243
02408.38688.371413.889147.355
03200.305246.3721441.79169.533
04208.846213.688460.5671174.899
05253.6911324.429334.901144.979
061669.818104.689264.68118.813
071168.812121.664742.50225.022
081764.4798.364218.65266.504
0999.29227.1171828.759102.832
1062.10583.4271675.895236.573
11127.539219.986442.561267.914
12290.4631481.283206.81479.439
131631.06366.865251.831108.241
PWM
ACGT
010.649-1.0790.437-1.62
02-0.23-1.7441.009-1.241
03-0.938-0.7321.028-1.103
04-0.896-0.873-0.110.824
05-0.7030.943-0.427-1.257
061.175-1.578-0.661-3.216
070.818-1.430.366-2.954
081.23-3.918-0.851-2.021
09-1.63-2.8791.266-1.595
10-2.088-1.81.178-0.773
11-1.384-0.845-0.150.9
12-0.5691.055-0.906-1.848
131.151-2.016-0.711-1.545