Model info
Transcription factorNR4A1
ModelNR4A1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
0
ConsensusAAAKKbYAn
Best auROC (human)0.9199926918939705
Best auROC (mouse)0.546951073303305
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)2
Aligned words491
TF familyNGFI-B-related receptors (NR4){2.1.4}
TF subfamilyNGFI-B (NR4A1){2.1.4.0.1}
HGNC7980
EntrezGene3164
UniProt IDNR4A1_HUMAN
UniProt ACP22736
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.73392
0.0005 6.33019
0.0001 7.6665600000000005
GTEx tissue expression atlas NR4A1 expression
ReMap ChIP-seq dataset list NR4A1 datasets
Motifs in JASPAR
PCM
ACGT
01390.018.073.010.0
02401.08.070.012.0
03446.013.026.06.0
0462.04.0287.0138.0
0535.028.0392.036.0
0654.071.0138.0228.0
0728.0387.034.042.0
08420.07.020.044.0
09118.0125.0166.082.0
PWM
ACGT
011.147-1.85-0.511-2.376
021.175-2.566-0.552-2.216
031.281-2.145-1.507-2.801
04-0.671-3.1090.8420.116
05-1.224-1.4371.153-1.197
06-0.805-0.5380.1160.613
07-1.4371.14-1.252-1.049
081.221-2.677-1.752-1.004
09-0.0390.0180.299-0.397