Model info
Transcription factorNR6A1
ModelNR6A1_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
B
Motif rank
0
ConsensusRAGKTCAAGKTCA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words51
TF familyGCNF-related receptors (NR6){2.1.6}
TF subfamilyGCNF (NR6A1){2.1.6.0.1}
HGNC7985
EntrezGene2649
UniProt IDNR6A1_HUMAN
UniProt ACQ15406
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.254415
0.0005 5.34412
0.0001 7.5448450000000005
GTEx tissue expression atlas NR6A1 expression
ReMap ChIP-seq dataset list NR6A1 datasets
Motifs in JASPAR
PCM
ACGT
0138.6943.4725.3612.472
0247.01.01.01.0
032.00.046.8891.111
040.02.019.029.0
050.01.00.049.0
061.049.00.00.0
0749.01.00.00.0
0843.7782.1111.03.111
090.01.044.7784.222
101.00.030.019.0
112.04.7782.041.222
122.11142.8890.05.0
1342.7782.1112.1113.0
PWM
ACGT
011.08-1.108-0.754-1.363
021.27-1.919-1.919-1.919
03-1.51-2.6231.267-1.864
04-2.623-1.510.3940.799
05-2.623-1.919-2.6231.311
06-1.9191.311-2.623-2.623
071.311-1.919-2.623-2.623
081.2-1.473-1.919-1.193
09-2.623-1.9191.222-0.952
10-1.919-2.6230.8320.394
11-1.51-0.851-1.511.141
12-1.4731.18-2.623-0.813
131.178-1.473-1.473-1.22