Model info
Transcription factorNr6a1
ModelNR6A1_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusnvdddbYCAWRKbYRn
Best auROC (human)
Best auROC (mouse)0.8023829625066061
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)5
Aligned words505
TF familyGCNF-related receptors (NR6){2.1.6}
TF subfamilyGCNF (NR6A1){2.1.6.0.1}
MGI1352459
EntrezGene14536
UniProt IDNR6A1_MOUSE
UniProt ACQ64249
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.89751
0.0005 12.47486
0.0001 15.73971
GTEx tissue expression atlas Nr6a1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0121.040.033.029.056.057.06.019.039.041.019.08.030.057.038.06.0
0262.011.047.026.0138.016.012.029.036.015.028.017.024.05.021.012.0
03179.026.021.034.020.013.06.08.069.07.021.011.028.09.024.023.0
0464.013.0188.031.022.03.011.019.023.03.028.018.016.07.019.034.0
057.028.054.036.04.010.02.010.04.018.0107.0117.02.019.041.040.0
061.08.00.08.04.034.00.037.03.087.06.0108.08.046.01.0148.0
070.014.02.00.07.0162.03.03.02.03.02.00.06.0277.017.01.0
0813.02.00.00.0421.026.07.02.022.00.02.00.03.01.00.00.0
09361.022.022.054.020.00.02.07.07.00.01.01.01.01.00.00.0
1051.04.0306.028.05.01.012.05.02.01.021.01.04.00.046.012.0
119.03.037.013.00.01.02.03.017.05.0227.0136.03.00.036.07.0
122.011.06.010.04.00.01.04.012.099.057.0134.07.030.030.092.0
136.016.00.03.09.0105.05.021.010.071.03.010.013.0174.016.037.0
1423.02.08.05.0313.018.015.020.07.02.08.07.033.05.022.011.0
1586.065.0133.092.06.06.02.013.012.013.08.020.022.02.06.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.390.2460.056-0.0720.580.597-1.598-0.4880.2210.271-0.488-1.326-0.0380.5970.195-1.598
020.681-1.020.406-0.1791.478-0.656-0.936-0.0720.142-0.719-0.106-0.597-0.258-1.768-0.39-0.936
031.737-0.179-0.390.085-0.437-0.858-1.598-1.3260.787-1.452-0.39-1.02-0.106-1.213-0.258-0.3
040.713-0.8581.786-0.006-0.344-2.232-1.02-0.488-0.3-2.232-0.106-0.541-0.656-1.452-0.4880.085
05-1.452-0.1060.5440.142-1.973-1.112-2.582-1.112-1.973-0.5411.2241.313-2.582-0.4880.2710.246
06-3.124-1.326-4.398-1.326-1.9730.085-4.3980.169-2.2321.018-1.5981.233-1.3260.385-3.1241.547
07-4.398-0.786-2.582-4.398-1.4521.638-2.232-2.232-2.582-2.232-2.582-4.398-1.5982.173-0.597-3.124
08-0.858-2.582-4.398-4.3982.591-0.179-1.452-2.582-0.344-4.398-2.582-4.398-2.232-3.124-4.398-4.398
092.438-0.344-0.3440.544-0.437-4.398-2.582-1.452-1.452-4.398-3.124-3.124-3.124-3.124-4.398-4.398
100.487-1.9732.272-0.106-1.768-3.124-0.936-1.768-2.582-3.124-0.39-3.124-1.973-4.3980.385-0.936
11-1.213-2.2320.169-0.858-4.398-3.124-2.582-2.232-0.597-1.7681.9741.463-2.232-4.3980.142-1.452
12-2.582-1.02-1.598-1.112-1.973-4.398-3.124-1.973-0.9361.1470.5971.448-1.452-0.038-0.0381.074
13-1.598-0.656-4.398-2.232-1.2131.205-1.768-0.39-1.1120.816-2.232-1.112-0.8581.709-0.6560.169
14-0.3-2.582-1.326-1.7682.295-0.541-0.719-0.437-1.452-2.582-1.326-1.4520.056-1.768-0.344-1.02
151.0060.7281.4411.074-1.598-1.598-2.582-0.858-0.936-0.858-1.326-0.437-0.344-2.582-1.598-0.858