Model info
Transcription factorNr6a1
ModelNR6A1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
D
Motif rank
0
ConsensusdRKKYCAAGKbYW
Best auROC (human)
Best auROC (mouse)0.784
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)5
Aligned words501
TF familyGCNF-related receptors (NR6) {2.1.6}
TF subfamilyGCNF (NR6A1) {2.1.6.0.1}
MGIMGI:1352459
EntrezGeneGeneID:14536
(SSTAR profile)
UniProt IDNR6A1_MOUSE
UniProt ACQ64249
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.57431
0.0005 6.372215
0.0001 7.985389999999999
GTEx tissue expression atlas Nr6a1 expression
Motifs in JASPAR
PCM
ACGT
01271.030.0127.072.0
02301.054.087.058.0
0399.016.0277.0108.0
049.062.0217.0212.0
0526.0165.017.0292.0
0614.0473.09.04.0
07442.054.02.02.0
08442.012.024.022.0
0992.02.0398.08.0
1030.020.0281.0169.0
1137.0122.091.0250.0
1242.0354.028.076.0
13355.030.055.060.0
PWM
ACGT
010.767-1.3890.016-0.543
020.872-0.823-0.357-0.754
03-0.23-1.9750.789-0.144
04-2.484-0.6890.5460.523
05-1.5250.275-1.920.841
06-2.0961.322-2.484-3.126
071.254-0.823-3.573-3.573
081.254-2.234-1.6-1.681
09-0.302-3.5731.15-2.584
10-1.389-1.770.8030.298
11-1.189-0.024-0.3130.687
12-1.0671.033-1.454-0.49
131.036-1.389-0.805-0.721