Model info
Transcription factorNRF1
ModelNRF1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusbdSYGCGCMKGCGCvdv
Best auROC (human)0.9989732327723339
Best auROC (mouse)0.9974824020049678
Peak sets in benchmark (human)31
Peak sets in benchmark (mouse)23
Aligned words501
TF familyNRF{0.0.6}
TF subfamilyNRF-1 (alpha-pal){0.0.6.0.1}
HGNC7996
EntrezGene4899
UniProt IDNRF1_HUMAN
UniProt ACQ16656
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.7774399999999999
0.0005 0.44051000000000007
0.0001 3.00901
GTEx tissue expression atlas NRF1 expression
ReMap ChIP-seq dataset list NRF1 datasets
Motifs in JASPAR
PCM
ACGT
0154.0279.073.094.0
02214.062.079.0145.0
0327.0257.0171.045.0
0428.050.023.0399.0
0545.01.0454.00.0
0614.0484.02.00.0
075.00.0494.01.0
081.0496.01.02.0
09391.069.024.016.0
1020.038.082.0360.0
114.05.0488.03.0
127.0457.01.035.0
130.021.0433.046.0
144.0400.07.089.0
15213.097.0158.032.0
16140.070.0189.0101.0
1757.0148.0261.034.0
PWM
ACGT
01-0.8230.796-0.529-0.281
020.533-0.689-0.4520.147
03-1.4890.7140.31-1.0
04-1.454-0.898-1.641.152
05-1.0-3.9031.281-4.4
06-2.0961.345-3.573-4.4
07-2.961-4.41.365-3.903
08-3.9031.369-3.903-3.573
091.132-0.584-1.6-1.975
10-1.77-1.163-0.4151.05
11-3.126-2.9611.353-3.325
12-2.6941.287-3.903-1.242
13-4.4-1.7251.234-0.979
14-3.1261.155-2.694-0.335
150.528-0.250.232-1.328
160.112-0.570.409-0.21
17-0.7710.1670.73-1.27