Model info
Transcription factorNrf1
ModelNRF1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusYdvYGCGCMKGCGCvvv
Best auROC (human)0.9987595590527586
Best auROC (mouse)0.9973324837389831
Peak sets in benchmark (human)31
Peak sets in benchmark (mouse)23
Aligned words500
TF familyNRF{0.0.6}
TF subfamilyNRF-1 (alpha-pal){0.0.6.0.1}
MGI1332235
EntrezGene18181
UniProt IDNRF1_MOUSE
UniProt ACQ9WU00
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -1.2930899999999999
0.0005 -0.059090000000000004
0.0001 2.54326
GTEx tissue expression atlas Nrf1 expression
Motifs in JASPAR
PCM
ACGT
0133.0324.051.092.0
02227.066.092.0115.0
0341.0251.0172.036.0
0423.061.037.0379.0
0522.04.0474.00.0
0620.0466.014.00.0
071.02.0496.01.0
082.0491.04.03.0
09355.088.026.031.0
1015.040.083.0362.0
110.04.0495.01.0
121.0473.01.025.0
133.012.0447.038.0
141.0447.02.050.0
15176.0117.0171.036.0
16134.096.0211.059.0
1748.0175.0242.035.0
PWM
ACGT
01-1.2980.945-0.879-0.302
020.591-0.628-0.302-0.082
03-1.090.6910.316-1.215
04-1.64-0.705-1.1891.101
05-1.681-3.1261.324-4.4
06-1.771.307-2.096-4.4
07-3.903-3.5731.369-3.903
08-3.5731.359-3.126-3.325
091.036-0.346-1.525-1.358
10-2.034-1.114-0.4031.055
11-4.4-3.1261.367-3.903
12-3.9031.322-3.903-1.561
13-3.325-2.2341.265-1.163
14-3.9031.265-3.573-0.898
150.339-0.0650.31-1.215
160.069-0.260.519-0.737
17-0.9380.3330.655-1.242