Model info
Transcription factorOLIG1
ModelOLIG1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length14
Quality
D
Motif rank
0
ConsensusAMCATATGTTTWbb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words495
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
HGNC16983
EntrezGene116448
UniProt IDOLIG1_HUMAN
UniProt ACQ8TAK6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.6453800000000001
0.0005 2.28995
0.0001 5.63441
GTEx tissue expression atlas OLIG1 expression
ReMap ChIP-seq dataset list OLIG1 datasets
Motifs in JASPAR
PCM
ACGT
01411.023.037.024.0
02194.25273.2527.250.25
030.0495.00.00.0
04495.00.00.00.0
050.00.00.0495.0
06495.00.00.00.0
070.00.00.0495.0
080.00.0495.00.0
090.011.071.0413.0
100.03.00.0492.0
1117.7525.7511.75439.75
1268.061.024.0342.0
1360.077.061.0297.0
1481.75109.75100.75202.75
PWM
ACGT
011.192-1.63-1.179-1.59
020.4460.785-1.47-4.242
03-4.3921.377-4.392-4.392
041.377-4.392-4.392-4.392
05-4.392-4.392-4.3921.377
061.377-4.392-4.392-4.392
07-4.392-4.392-4.3921.377
08-4.392-4.3921.377-4.392
09-4.392-2.301-0.5461.196
10-4.392-3.315-4.3921.371
11-1.871-1.524-2.2431.259
12-0.589-0.695-1.591.009
13-0.711-0.467-0.6950.868
14-0.408-0.118-0.2030.489