Model info
Transcription factorOLIG2
ModelOLIG2_HUMAN.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
B
Motif rank
1
ConsensushMWKMTGYYb
Best auROC (human)
Best auROC (mouse)0.9052493251087635
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)19
Aligned words500
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
HGNC9398
EntrezGene10215
UniProt IDOLIG2_HUMAN
UniProt ACQ13516
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.5163
0.0005 6.13333
0.0001 7.24258
GTEx tissue expression atlas OLIG2 expression
ReMap ChIP-seq dataset list OLIG2 datasets
Motifs in JASPAR
PCM
ACGT
0187.0291.058.062.0
02114.0365.03.016.0
03329.032.034.0103.0
0414.027.0198.0259.0
0586.0348.026.038.0
068.04.04.0482.0
075.012.0426.055.0
084.0160.0107.0227.0
0919.0163.039.0277.0
1076.0125.086.0211.0
PWM
ACGT
01-0.3530.842-0.75-0.685
02-0.0871.067-3.321-1.971
030.964-1.324-1.266-0.187
04-2.092-1.4850.4590.726
05-0.3641.02-1.521-1.159
06-2.58-3.122-3.1221.344
07-2.957-2.231.221-0.802
08-3.1220.248-0.1490.595
09-1.8140.267-1.1340.793
10-0.4860.004-0.3640.522