Model info
Transcription factorOlig2
ModelOLIG2_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusMCAKCTGYYbbbhdbhhb
Best auROC (human)
Best auROC (mouse)0.9253615100318717
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)19
Aligned words500
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
MGI1355331
EntrezGene50913
UniProt IDOLIG2_MOUSE
UniProt ACQ9EQW6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.250259999999999
0.0005 6.12321
0.0001 7.887510000000001
GTEx tissue expression atlas Olig2 expression
Motifs in JASPAR
PCM
ACGT
01108.0310.071.011.0
0276.0413.02.09.0
03420.08.013.059.0
044.013.0245.0238.0
0577.0392.025.06.0
0617.07.03.0473.0
070.07.0456.037.0
086.0181.090.0223.0
0912.0126.017.0345.0
1040.0129.077.0254.0
1149.0216.093.0142.0
1252.0245.057.0146.0
1388.0191.083.0138.0
14134.043.096.0227.0
1541.0130.0146.0183.0
1694.0226.068.0112.0
17114.0115.051.0220.0
1865.099.0170.0166.0
PWM
ACGT
01-0.1440.901-0.556-2.311
02-0.491.187-3.573-2.484
031.203-2.584-2.163-0.737
04-3.126-2.1630.6670.638
05-0.4771.135-1.561-2.819
06-1.92-2.694-3.3251.322
07-4.4-2.6941.285-1.189
08-2.8190.366-0.3240.573
09-2.2340.008-1.921.007
10-1.1140.031-0.4770.703
11-0.9180.542-0.2910.126
12-0.860.667-0.7710.154
13-0.3460.42-0.4030.098
140.069-1.044-0.260.591
15-1.090.0390.1540.377
16-0.2810.587-0.599-0.108
17-0.091-0.082-0.8790.56
18-0.643-0.230.3040.281