Model info
Transcription factorOlig2
ModelOLIG2_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
1
ConsensushMWKMTGYYb
Best auROC (human)
Best auROC (mouse)0.9052493251087635
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)19
Aligned words500
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
MGI1355331
EntrezGene50913
UniProt IDOLIG2_MOUSE
UniProt ACQ9EQW6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.547185
0.0005 6.157305
0.0001 7.299300000000001
GTEx tissue expression atlas Olig2 expression
Motifs in JASPAR
PCM
ACGT
0187.0291.058.062.0
02114.0365.03.016.0
03329.032.034.0103.0
0414.027.0198.0259.0
0586.0348.026.038.0
068.04.04.0482.0
075.012.0426.055.0
084.0160.0107.0227.0
0919.0163.039.0277.0
1076.0125.086.0211.0
PWM
ACGT
01-0.3530.842-0.75-0.685
02-0.0871.067-3.321-1.971
030.964-1.324-1.266-0.187
04-2.092-1.4850.4590.726
05-0.3641.02-1.521-1.159
06-2.58-3.122-3.1221.344
07-2.957-2.231.221-0.802
08-3.1220.248-0.1490.595
09-1.8140.267-1.1340.793
10-0.4860.004-0.3640.522