Model info
Transcription factorOnecut2
ModelONEC2_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length21
Quality
D
Motif rank
0
ConsensusRKvhYdTbATKGATTWTWTTW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyHD-CUT factors{3.1.9}
TF subfamilyONECUT{3.1.9.1}
MGI1891408
EntrezGene225631
UniProt IDONEC2_MOUSE
UniProt ACQ6XBJ3
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.73736
0.0005 6.54221
0.0001 8.23781
GTEx tissue expression atlas Onecut2 expression
Motifs in JASPAR
PCM
ACGT
012.0780.02.9531.969
020.9840.02.0783.938
030.9843.0632.0780.875
041.8591.0940.9843.063
050.9841.0940.9843.938
060.9840.8753.1721.969
073.1720.00.03.828
080.00.9840.9845.031
097.00.00.00.0
100.00.00.07.0
110.01.0941.9693.938
121.0940.05.9060.0
137.00.00.00.0
140.01.9690.05.031
150.00.00.07.0
161.9690.8750.04.156
171.9690.00.05.031
181.9690.00.9844.047
190.02.9530.04.047
200.03.0630.03.938
211.8591.0940.04.047
PWM
ACGT
010.137-1.5250.430.093
02-0.419-1.5250.1370.682
03-0.4190.4620.137-0.496
040.048-0.347-0.4190.462
05-0.419-0.347-0.4190.682
06-0.419-0.4960.4920.093
070.492-1.525-1.5250.657
08-1.525-0.419-0.4190.903
091.208-1.525-1.525-1.525
10-1.525-1.525-1.5251.208
11-1.525-0.3470.0930.682
12-0.347-1.5251.05-1.525
131.208-1.525-1.525-1.525
14-1.5250.093-1.5250.903
15-1.525-1.525-1.5251.208
160.093-0.496-1.5250.73
170.093-1.525-1.5250.903
180.093-1.525-0.4190.707
19-1.5250.43-1.5250.707
20-1.5250.462-1.5250.682
210.048-0.347-1.5250.707