Model info
Transcription factorOTX1
ModelOTX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length8
Quality
D
Motif rank
0
ConsensusnGGATTAn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyPaired-related HD factors{3.1.3}
TF subfamilyOTX{3.1.3.17}
HGNC8521
EntrezGene5013
UniProt IDOTX1_HUMAN
UniProt ACP32242
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.11337
0.0005 5.892635
0.0001 6.680255000000001
GTEx tissue expression atlas OTX1 expression
ReMap ChIP-seq dataset list OTX1 datasets
Motifs in JASPAR
PCM
ACGT
013.6551.4481.4481.448
021.2410.05.9310.828
030.00.08.00.0
045.3792.6210.00.0
050.00.00.08.0
060.00.00.08.0
078.00.00.00.0
082.2762.2762.8280.621
PWM
ACGT
010.505-0.247-0.247-0.247
02-0.358-1.5780.94-0.626
03-1.578-1.5781.218-1.578
040.8510.22-1.578-1.578
05-1.578-1.578-1.5781.218
06-1.578-1.578-1.5781.218
071.218-1.578-1.578-1.578
080.1040.1040.284-0.793