Model info
Transcription factorOvol2
ModelOVOL2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length8
Quality
C
Motif rank
0
ConsensusdTAACGGd
Best auROC (human)0.453
Best auROC (mouse)0.952
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words197
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyOVOL-factors {2.3.3.17}
MGIMGI:1338039
EntrezGeneGeneID:107586
(SSTAR profile)
UniProt IDOVOL2_MOUSE
UniProt ACQ8CIV7
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.1961649999999997
0.0005 3.45179
0.0001 4.0172799999999995
GTEx tissue expression atlas Ovol2 expression
Motifs in JASPAR
PCM
ACGT
0182.034.043.038.0
020.00.00.0197.0
03197.00.00.00.0
04189.00.08.00.0
050.0197.00.00.0
060.00.0197.00.0
070.00.0197.00.0
0872.015.041.069.0
PWM
ACGT
010.499-0.359-0.132-0.252
02-3.645-3.645-3.6451.367
031.367-3.645-3.645-3.645
041.325-3.645-1.691-3.645
05-3.6451.367-3.645-3.645
06-3.645-3.6451.367-3.645
07-3.645-3.6451.367-3.645
080.371-1.131-0.1780.33