Model info
Transcription factorTP53
ModelP53_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusdRRCWWGYYCWRRCATGYYh
Best auROC (human)0.9953157015440742
Best auROC (mouse)0.9792336386099629
Peak sets in benchmark (human)141
Peak sets in benchmark (mouse)39
Aligned words487
TF familyp53-related factors{6.3.1}
TF subfamilyp53{6.3.1.0.1}
HGNC11998
EntrezGene7157
UniProt IDP53_HUMAN
UniProt ACP04637
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.1943599999999996
0.0005 3.4412599999999998
0.0001 6.07681
GTEx tissue expression atlas TP53 expression
ReMap ChIP-seq dataset list TP53 datasets
Motifs in JASPAR
PCM
ACGT
01179.041.0174.092.0
0289.019.0324.054.0
03254.023.0184.025.0
043.0440.010.033.0
05334.028.016.0108.0
06105.03.023.0355.0
073.01.0475.07.0
0824.0251.04.0207.0
0953.0327.017.089.0
1011.0399.041.035.0
11351.054.019.062.0
1281.021.0365.019.0
13306.03.0165.012.0
140.0481.04.01.0
15385.021.03.077.0
1658.025.015.0388.0
1720.09.0453.04.0
1829.0228.015.0214.0
1957.0304.019.0106.0
2047.0258.032.0149.0
PWM
ACGT
010.383-1.0620.355-0.274
02-0.307-1.790.973-0.795
030.731-1.6120.411-1.534
04-3.2981.278-2.366-1.27
051.003-1.427-1.948-0.116
06-0.144-3.298-1.6121.064
07-3.298-3.8781.354-2.667
08-1.5720.719-3.0990.528
09-0.8140.982-1.892-0.307
10-2.2831.18-1.062-1.214
111.053-0.795-1.79-0.661
12-0.399-1.6971.092-1.79
130.916-3.2980.303-2.206
14-4.3771.367-3.099-3.878
151.145-1.697-3.298-0.449
16-0.726-1.534-2.0061.152
17-1.742-2.4571.307-3.099
18-1.3930.624-2.0060.561
19-0.7430.91-1.79-0.135
20-0.930.746-1.30.202