Model info
Transcription factorTP53
ModelP53_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
1
ConsensusdRRCATGYCYRKR
Best auROC (human)0.9883596437267886
Best auROC (mouse)0.9812134622410779
Peak sets in benchmark (human)141
Peak sets in benchmark (mouse)39
Aligned words500
TF familyp53-related factors{6.3.1}
TF subfamilyp53{6.3.1.0.1}
HGNC11998
EntrezGene7157
UniProt IDP53_HUMAN
UniProt ACP04637
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.00186
0.0005 5.05441
0.0001 7.203270000000001
GTEx tissue expression atlas TP53 expression
ReMap ChIP-seq dataset list TP53 datasets
Motifs in JASPAR
PCM
ACGT
01111.043.0280.066.0
02111.029.0315.045.0
03268.03.0204.025.0
041.0490.05.04.0
05423.00.03.074.0
0685.01.018.0396.0
070.04.0496.00.0
0811.0302.02.0185.0
0911.0444.011.034.0
1054.0155.012.0279.0
11104.025.0334.037.0
1245.09.0384.062.0
13140.010.0337.013.0
PWM
ACGT
01-0.117-1.0440.8-0.628
02-0.117-1.4210.917-1.0
030.756-3.3250.485-1.561
04-3.9031.357-2.961-3.126
051.21-4.4-3.325-0.516
06-0.38-3.903-1.8681.145
07-4.4-3.1261.369-4.4
08-2.3110.875-3.5730.388
09-2.3111.259-2.311-1.27
10-0.8230.213-2.2340.796
11-0.181-1.5610.975-1.189
12-1.0-2.4841.114-0.689
130.112-2.3940.984-2.163