Model info
Transcription factorTp53
ModelP53_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
1
ConsensusdRRCAWGYCYRGR
Best auROC (human)0.986626413159086
Best auROC (mouse)0.9811088905242323
Peak sets in benchmark (human)141
Peak sets in benchmark (mouse)39
Aligned words504
TF familyp53-related factors{6.3.1}
TF subfamilyp53{6.3.1.0.1}
MGI98834
EntrezGene22059
UniProt IDP53_MOUSE
UniProt ACP02340
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.9860100000000003
0.0005 5.085715
0.0001 7.299875
GTEx tissue expression atlas Tp53 expression
Motifs in JASPAR
PCM
ACGT
01163.023.0254.060.0
02112.013.0343.032.0
03278.01.0203.018.0
040.0495.03.02.0
05441.01.06.052.0
06124.00.017.0359.0
070.00.0500.00.0
0812.0307.02.0179.0
0914.0418.014.054.0
1056.0249.021.0174.0
11181.012.0263.044.0
1241.011.0415.033.0
13129.09.0347.015.0
PWM
ACGT
010.263-1.640.703-0.721
02-0.108-2.1631.002-1.328
030.793-3.9030.48-1.868
04-4.41.367-3.325-3.573
051.252-3.903-2.819-0.86
06-0.008-4.4-1.921.047
07-4.4-4.41.377-4.4
08-2.2340.891-3.5730.355
09-2.0961.199-2.096-0.823
10-0.7880.683-1.7250.327
110.366-2.2340.737-1.022
12-1.09-2.3111.191-1.298
130.031-2.4841.013-2.034