Model info
Transcription factorTP73
ModelP73_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusdddCWWGYYMMdRCWdGYh
Best auROC (human)0.9963702372799416
Best auROC (mouse)
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)
Aligned words500
TF familyp53-related factors{6.3.1}
TF subfamilyp73{6.3.1.0.3}
HGNC12003
EntrezGene7161
UniProt IDP73_HUMAN
UniProt ACO15350
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.16436
0.0005 5.15531
0.0001 7.22851
GTEx tissue expression atlas TP73 expression
ReMap ChIP-seq dataset list TP73 datasets
Motifs in JASPAR
PCM
ACGT
01178.080.0160.082.0
02161.046.0200.093.0
03195.038.0190.077.0
0417.0437.020.026.0
05305.074.034.087.0
06156.06.039.0299.0
074.05.0488.03.0
0834.0240.07.0219.0
0968.0293.037.0102.0
1061.0370.042.027.0
11309.0106.05.080.0
12142.043.0257.058.0
13278.019.0157.046.0
145.0477.012.06.0
15251.080.013.0156.0
1655.048.055.0342.0
1717.06.0470.07.0
1844.0250.021.0185.0
1994.0255.041.0110.0
PWM
ACGT
010.35-0.4390.244-0.415
020.25-0.9790.465-0.291
030.44-1.1630.415-0.477
04-1.921.243-1.77-1.525
050.885-0.516-1.27-0.357
060.219-2.819-1.1380.865
07-3.126-2.9611.353-3.325
08-1.270.646-2.6940.555
09-0.5990.845-1.189-0.201
10-0.7051.077-1.067-1.489
110.898-0.163-2.961-0.439
120.126-1.0440.714-0.754
130.793-1.8180.225-0.979
14-2.9611.33-2.234-2.819
150.691-0.439-2.1630.219
16-0.805-0.938-0.8050.999
17-1.92-2.8191.315-2.694
18-1.0220.687-1.7250.388
19-0.2810.707-1.09-0.126