Model info
Transcription factorPATZ1
ModelPATZ1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length22
Quality
C
Motif rank
0
ConsensusdKRGvRRRGRMKSvRvndRvRb
Best auROC (human)0.9169278916004164
Best auROC (mouse)
Peak sets in benchmark (human)6
Peak sets in benchmark (mouse)
Aligned words498
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilyMAZ-like factors{2.3.4.8}
HGNC13071
EntrezGene23598
UniProt IDPATZ1_HUMAN
UniProt ACQ9HBE1
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.36456
0.0005 4.32191
0.0001 6.34421
GTEx tissue expression atlas PATZ1 expression
ReMap ChIP-seq dataset list PATZ1 datasets
Motifs in JASPAR
PCM
ACGT
01115.045.0275.056.0
0267.013.0314.097.0
0370.041.0335.045.0
0420.042.0413.016.0
05225.0141.067.058.0
06120.030.0306.035.0
0770.015.0347.059.0
08106.032.0340.013.0
0962.08.0416.05.0
10104.058.0302.027.0
11205.0274.04.08.0
1239.014.0272.0166.0
1314.070.0376.031.0
1479.079.0298.035.0
15161.031.0284.015.0
16143.094.0243.011.0
17118.0118.0171.084.0
1878.037.0283.093.0
1963.028.0380.020.0
20203.0107.0154.027.0
21156.07.0306.022.0
2268.0100.0240.083.0
PWM
ACGT
01-0.064-0.9820.8-0.77
02-0.595-2.1450.932-0.232
03-0.552-1.0720.996-0.982
04-1.752-1.0491.205-1.958
050.60.137-0.595-0.736
06-0.022-1.3710.906-1.224
07-0.552-2.0161.031-0.719
08-0.145-1.311.011-2.145
09-0.671-2.5661.212-2.943
10-0.164-0.7360.893-1.471
110.5080.796-3.109-2.566
12-1.12-2.0790.7890.299
13-2.079-0.5521.111-1.34
14-0.434-0.4340.88-1.224
150.268-1.340.832-2.016
160.151-0.2630.677-2.293
17-0.039-0.0390.328-0.374
18-0.446-1.1710.828-0.274
19-0.655-1.4371.122-1.752
200.498-0.1350.224-1.471
210.237-2.6770.906-1.664
22-0.581-0.2020.664-0.385