Model info
Transcription factorPAX1
ModelPAX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensushbGTCACGCWTSAnTKv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1173
TF familyPaired domain only{3.2.2}
TF subfamilyPAX-1/9 (no homeo remnant){3.2.2.1}
HGNC8615
EntrezGene5075
UniProt IDPAX1_HUMAN
UniProt ACP15863
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.7587600000000001
0.0005 2.05961
0.0001 4.77046
GTEx tissue expression atlas PAX1 expression
ReMap ChIP-seq dataset list PAX1 datasets
Motifs in JASPAR
PCM
ACGT
01209.25332.25182.25449.25
0299.5575.5350.5147.5
0341.7540.751039.7550.75
0478.556.534.51003.5
057.0963.01.0202.0
061078.088.04.03.0
072.01010.04.0157.0
085.03.01161.04.0
096.0912.0252.03.0
10436.020.03.0714.0
114.25106.254.251058.25
126.25373.25762.2531.25
13960.01.0207.05.0
14215.5369.5333.5254.5
1520.2575.2513.251064.25
16108.033.0819.0213.0
17442.75374.75272.7582.75
PWM
ACGT
01-0.3350.124-0.4720.424
02-1.0690.6710.177-0.681
03-1.914-1.9371.261-1.726
04-1.302-1.622-2.0961.226
05-3.5161.185-4.669-0.37
061.297-1.19-3.935-4.125
07-4.3611.232-3.935-0.62
08-3.775-4.1251.372-3.935
09-3.6371.131-0.151-4.125
100.395-2.607-4.1250.886
11-3.892-1.005-3.8921.279
12-3.6050.240.952-2.19
131.182-4.669-0.346-3.775
14-0.3060.230.128-0.141
15-2.595-1.343-2.9781.285
16-0.989-2.1381.023-0.317
170.410.244-0.072-1.25