Model info
Transcription factorPAX3
ModelPAX3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensusvhTAATCGATTAh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words5195
TF familyPaired plus homeo domain{3.2.1}
TF subfamilyPAX-3/7{3.2.1.1}
HGNC8617
EntrezGene5077
UniProt IDPAX3_HUMAN
UniProt ACP23760
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -2.71663
0.0005 -0.6746800000000001
0.0001 3.6394399999999996
GTEx tissue expression atlas PAX3 expression
ReMap ChIP-seq dataset list PAX3 datasets
Motifs in JASPAR
PCM
ACGT
01946.25781.252741.25594.25
022154.5839.5555.51513.5
0365.046.046.04906.0
045061.250.251.250.25
055063.00.00.00.0
060.00.00.05063.0
070.02929.00.02134.0
081.00.05062.00.0
095061.00.02.00.0
100.00.00.05063.0
110.00.00.05063.0
124815.543.545.5158.5
132225.75604.75377.751854.75
PWM
ACGT
01-0.29-0.4810.772-0.754
020.531-0.41-0.8210.178
03-2.938-3.271-3.2711.354
041.385-6.277-5.927-6.277
051.385-6.388-6.388-6.388
06-6.388-6.388-6.3881.385
07-6.3880.838-6.3880.522
08-6.003-6.3881.385-6.388
091.385-6.388-5.726-6.388
10-6.388-6.388-6.3881.385
11-6.388-6.388-6.3881.385
121.335-3.324-3.282-2.066
130.564-0.737-1.2050.382