Model info
Transcription factorPax3
ModelPAX3_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
D
Motif rank
0
ConsensusndnWMATKGvWKh
Best auROC (human)
Best auROC (mouse)0.7733271715218906
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words455
TF familyPaired plus homeo domain{3.2.1}
TF subfamilyPAX-3/7{3.2.1.1}
MGI97487
EntrezGene18505
UniProt IDPAX3_MOUSE
UniProt ACP24610
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.69936
0.0005 6.386315
0.0001 7.782375
GTEx tissue expression atlas Pax3 expression
Motifs in JASPAR
PCM
ACGT
01135.073.0164.083.0
0293.076.0190.096.0
0398.0148.0123.086.0
04118.016.018.0303.0
05326.099.026.04.0
06439.09.01.06.0
075.032.046.0372.0
0810.022.090.0333.0
0917.037.0379.022.0
10300.063.063.029.0
1177.049.033.0296.0
1252.039.054.0310.0
13235.042.036.0142.0
PWM
ACGT
010.169-0.4360.362-0.31
02-0.198-0.3970.508-0.167
03-0.1470.260.077-0.275
040.036-1.883-1.7750.971
051.044-0.137-1.432-3.037
061.341-2.393-3.819-2.728
07-2.871-1.235-0.8861.176
08-2.302-1.589-0.2311.065
09-1.828-1.0961.194-1.589
100.962-0.58-0.58-1.329
11-0.384-0.825-1.2060.948
12-0.767-1.045-0.730.994
130.719-0.974-1.1220.219