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Model info
Transcription factorPbx1
ModelPBX1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
1
ConsensusbbbYSATTGGYhd
Best auROC (human)0.876
Best auROC (mouse)0.915
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)36
Aligned words500
TF familyTALE-type homeo domain factors {3.1.4}
TF subfamilyPBX {3.1.4.4}
MGIMGI:97495
EntrezGeneGeneID:18514
(SSTAR profile)
UniProt IDPBX1_MOUSE
UniProt ACP41778
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.15836
0.0005 6.0366599999999995
0.0001 7.79907
GTEx tissue expression atlas Pbx1 expression
Motifs in JASPAR
MA0070.1 (PBX1; Homo sapiens)
PCM
ACGT
0159.0215.066.0160.0
0237.088.0118.0257.0
0353.0216.0114.0117.0
0412.093.029.0366.0
0514.0115.0330.041.0
06481.012.03.04.0
076.030.017.0447.0
084.00.03.0493.0
096.00.0455.039.0
10129.04.0360.07.0
1145.0304.014.0137.0
1296.0118.053.0233.0
13165.054.0224.057.0
PWM
ACGT
01-0.7370.537-0.6280.244
02-1.189-0.346-0.0570.714
03-0.8410.542-0.091-0.065
04-2.234-0.291-1.4211.066
05-2.096-0.0820.963-1.09
061.338-2.234-3.325-3.126
07-2.819-1.389-1.921.265
08-3.126-4.4-3.3251.363
09-2.819-4.41.283-1.138
100.031-3.1261.05-2.694
11-1.00.881-2.0960.091
12-0.26-0.057-0.8410.617
130.275-0.8230.578-0.771